Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRC | rs12815222 | chr12:29499578 | A/G | 1.41E-7 | 523 | 40.57 | 39.47 | 5.8 | KM Plot |
| KIRC | rs12817163 | chr12:29422349 | A/G | 4.82E-8 | 524 | 40.6 | 39.47 | 6.07 | KM Plot |
| KIRC | rs12817578 | chr12:29500012 | T/A | 1.45E-7 | 522 | 40.57 | 39.23 | 5.8 | KM Plot |
| KIRC | rs12817985 | chr12:29422762 | A/T | 4.41E-8 | 524 | 41 | 38.57 | 6.07 | KM Plot |
| KIRC | rs12818302 | chr12:29422658 | G/A | 4.82E-8 | 524 | 40.6 | 39.47 | 6.07 | KM Plot |
| KIRC | rs12819896 | chr12:29535715 | A/G | 3.58E-8 | 519 | 40.28 | 39.47 | 6.07 | KM Plot |
| KIRC | rs12821498 | chr12:29435333 | C/G | 4.75E-8 | 525 | 40.8 | 39.47 | 6.07 | KM Plot |
| KIRC | rs12821559 | chr12:29542270 | G/T | 3.84E-8 | 517 | 40.57 | 39.7 | 6.07 | KM Plot |
| KIRC | rs12821708 | chr12:29514833 | C/T | 5.92E-8 | 524 | 40.57 | 39.47 | 6.07 | KM Plot |
| KIRC | rs12823372 | chr12:29472216 | G/A | 6.0E-8 | 524 | 40.58 | 39.23 | 6.07 | KM Plot |
| KIRC | rs12823422 | chr12:29423052 | C/G | 4.82E-8 | 524 | 40.6 | 39.47 | 6.07 | KM Plot |
| KIRC | rs12823485 | chr12:29479511 | G/A | 6.86E-8 | 521 | 40.58 | 39.47 | 6.07 | KM Plot |
| KIRC | rs12824407 | chr12:29511398 | C/A | 5.9E-8 | 524 | 40.58 | 39.23 | 6.07 | KM Plot |
| KIRC | rs12829666 | chr12:29524159 | T/C | 6.01E-8 | 524 | 40.57 | 39.85 | 6.07 | KM Plot |
| KIRC | rs12830274 | chr12:29424135 | A/G | 4.27E-8 | 525 | 41.27 | 37.9 | 6.07 | KM Plot |